CDS
| Accession Number | TCMCG007C48610 |
| gbkey | CDS |
| Protein Id | XP_033133966.1 |
| Location | complement(join(13860807..13861085,13861177..13861180,13861900..13862006,13862153..13862261,13862774..13862855,13863202..13863409,13863531..13863704,13863944..13864167,13864221..13864701)) |
| Gene | LOC103834581 |
| GeneID | 103834581 |
| Organism | Brassica rapa |
Protein
| Length | 555aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA249065 |
| db_source | XM_033278075.1 |
| Definition | polygalacturonase [Brassica rapa] |
EGGNOG-MAPPER Annotation
| COG_category | G |
| Description | Glycosyl hydrolases family 28 |
| KEGG_TC | - |
| KEGG_Module |
M00081
[VIEW IN KEGG] |
| KEGG_Reaction |
R01982
[VIEW IN KEGG] R02360 [VIEW IN KEGG] R07413 [VIEW IN KEGG] |
| KEGG_rclass |
RC00049
[VIEW IN KEGG] |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko00002 [VIEW IN KEGG] ko01000 [VIEW IN KEGG] |
| KEGG_ko |
ko:K01184
[VIEW IN KEGG] ko:K01213 [VIEW IN KEGG] |
| EC |
3.2.1.15
[VIEW IN KEGG]
[VIEW IN INGREDIENT] 3.2.1.67 [VIEW IN KEGG] [VIEW IN INGREDIENT] |
| KEGG_Pathway |
ko00040
[VIEW IN KEGG] ko01100 [VIEW IN KEGG] map00040 [VIEW IN KEGG] map01100 [VIEW IN KEGG] |
| GOs | - |
Sequence
| CDS: ATGCACGCCTTCTTCCTCTGTTCGTTCGTGCAGGAAGTGTGGCAAAAAGCTCCCCTCACAAAGACAGTTTACATAGATGCGACTGATGATTTCCAAGCTGTCTTGGTAAAGTTCCGACATGTAACTTGTCTTCCACCGTCAGGTATCTCATCCCCCGTCCTTCCTTGGATCTGCTGGTCGCTTTGGACGGCGAGAAACAGACTGATTTTCGAAGACAAGAAGCTCAACCCTAACGAAGTCATGCTTAGAAGTTTAGTCTCAGCTCGTGAATGGATCCAAGCTCAAGAAAATTTACCACAGAAGCACAAGTGTTACCTCAAGGGCCCCAGTTTCACCGGAACGATGCATGGTAGCAAGCAAACTACGACATGCAACTCCGACGCGTCTTGGAACTCAACTACTAGGAAAGCAGGCCTAGCGTGGATCATCTCAACACTGACATCAAATCAACTCCACGAAGGATCGCTACGCACTGAAAAACCAGCTGCAGATCTCGACATCATTAGCCTCAAGGTCTGCTCCGACTGTCAAACGCTCATTAGAGCAATCCAAAACAGGCCCCAGATTAAGGAAATCTTCGGTATCGTTTTCGATATCATGCAGATCTTCTCTGCATTCGCATCTATCTCTTTCTGTTTTGTTCCACGATCTGAGAACCGTAAAACTGATCTGTTAGGTAAACAAGCCTTAGTTTCATCTGCTTCTATTGATGGGAAACTTGAGGCGCCAAAAACGATTGAAGAGTGGGGAGACATAGGAGAAGGTAGGTGCTGGCTATGTTTCAAAAACGTGAAAGGTATCGTCCTCAATGGGTCTGGTGTCCTCCACCCTCATGGCGAAGCTTGGTGGTCGTCTGTTGATCACTCCAATCGACCACGGGCAGTTGGATTTAATGCAAGTGCTGACATAATATATAGTGGACTAACTCAATTCAATAGCCCAAAGAATCATGTTTCAGTTTATAATTGCACCAACGCAACTTTATCAAATCTTCATCTCATCGCACCTAAAGATAGTCCAAACAGTGATGGTATCGACATTGCTCTTTCAAACAATGTCCAGATTTTCAATTCATCTATCCAAACAGGTGACGATTGTGTTGCGATTAATGGTGGTTCACACGATATCAACATAACTCATGTGACATGTGGTCCGGGCCATGGCATCAGTATTGGAAGTTTGGGCAGAGATGGGCTAACTGAAACGGTTGAGAACGTGCAAGTAAGACACTGCAGCTTCAATGGTACTATGTATGGGGCAAGAATCAAAACTTGGGCTGGAGGCAAAGGGTTCGCCAAAAATATTATATACGAGAACATTACATTAATAGATGCCGCATATCCTATCATCATCGATCAGCATTATTGTAATGGTGGGTCAGAACTGAATGCTACTGCTGTGAAAGTGAGCGATGTGACATTTAGAAATTTCAGAGGGACATGCGCAGATGATATTGCGATAAAACTAGCTTGTGACAAGCTAGTAAATTGTCAAAACATCGTGATGGAAAATATAAACATCGTTTCTTCATCTTCAAAAGAGCATCTCTCCACGTATTGTCAATACGCTAATGTAGTTACTCACTTTGTCAACGTTGATATCAAGTGTGGTTCAACCTCAAGCTCCGACTTCGACCCCGTATTCTCAACCTCCGGCGCCCTGTGCTGA |
| Protein: MHAFFLCSFVQEVWQKAPLTKTVYIDATDDFQAVLVKFRHVTCLPPSGISSPVLPWICWSLWTARNRLIFEDKKLNPNEVMLRSLVSAREWIQAQENLPQKHKCYLKGPSFTGTMHGSKQTTTCNSDASWNSTTRKAGLAWIISTLTSNQLHEGSLRTEKPAADLDIISLKVCSDCQTLIRAIQNRPQIKEIFGIVFDIMQIFSAFASISFCFVPRSENRKTDLLGKQALVSSASIDGKLEAPKTIEEWGDIGEGRCWLCFKNVKGIVLNGSGVLHPHGEAWWSSVDHSNRPRAVGFNASADIIYSGLTQFNSPKNHVSVYNCTNATLSNLHLIAPKDSPNSDGIDIALSNNVQIFNSSIQTGDDCVAINGGSHDINITHVTCGPGHGISIGSLGRDGLTETVENVQVRHCSFNGTMYGARIKTWAGGKGFAKNIIYENITLIDAAYPIIIDQHYCNGGSELNATAVKVSDVTFRNFRGTCADDIAIKLACDKLVNCQNIVMENINIVSSSSKEHLSTYCQYANVVTHFVNVDIKCGSTSSSDFDPVFSTSGALC |